Difference between revisions of "Table of Handouts for ENAS 915"

From YalePETWiki
Jump to navigationJump to search
 
(28 intermediate revisions by 2 users not shown)
Line 1: Line 1:
−
Table of Handouts for ENAS&nbsp;915 --- Tracer Kinetics and Modeling<br>  
+
--[[User:Evan|Evan]] 14:05, 14 March 2013 (EDT)--[[User:Evan|Evan]] 14:05, 14 March 2013 (EDT)Table of Handouts for ENAS&nbsp;915 --- Tracer Kinetics and Modeling<br>  
  
 
Spring semester 2013  
 
Spring semester 2013  
  
 
Yale  
 
Yale  
 +
 +
== [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/Index.htm Back to ENAS 915 Homepage] ==
  
 
<br>  
 
<br>  
Line 11: Line 13:
 
[https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/book-excerpts/ location of book-excerpts] <br> [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/book-chapters/ location of book-chapters] <br> [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/papers/ location of papers] <br> [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/homework/ location of homework]  
 
[https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/book-excerpts/ location of book-excerpts] <br> [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/book-chapters/ location of book-chapters] <br> [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/papers/ location of papers] <br> [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/homework/ location of homework]  
  
−
{| border="3" style="background: none repeat scroll 0% 0% white; color: black;" class="wikitable sortable"
+
{| border="3" class="wikitable sortable" style="background: none repeat scroll 0% 0% white; color: black;"
 
|- style="background: none repeat scroll 0% 0% yellow;"
 
|- style="background: none repeat scroll 0% 0% yellow;"
 
! Class Period that covers the information<br>  
 
! Class Period that covers the information<br>  
Line 43: Line 45:
 
| TAC N207<br>
 
| TAC N207<br>
 
|-
 
|-
−
| <br>
+
| <br>  
 
| Kevles  
 
| Kevles  
 
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/book-excerpts/Naked_to_the_Bone_Medical_Imaging_in_the_Twentieth_Century.pdf chapter 9]  
 
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/book-excerpts/Naked_to_the_Bone_Medical_Imaging_in_the_Twentieth_Century.pdf chapter 9]  
Line 53: Line 55:
 
| TAC N207<br>
 
| TAC N207<br>
 
|-
 
|-
−
| <br>
+
| <br>  
 
| Levi  
 
| Levi  
 
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/book-excerpts/Levi_George_de_Hevesy_Life_and_Work.pdf The development of the tracer method]  
 
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/book-excerpts/Levi_George_de_Hevesy_Life_and_Work.pdf The development of the tracer method]  
Line 73: Line 75:
 
| TAC N207<br>
 
| TAC N207<br>
 
|-
 
|-
−
| <br>
+
| <br>  
 
| Cobelli, Foster, and Toffolo  
 
| Cobelli, Foster, and Toffolo  
 
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/book-chapters/tracer-kinetics-in-biomedical-research_cobelli.pdf Fundamentals of Tracer Kinetics]  
 
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/book-chapters/tracer-kinetics-in-biomedical-research_cobelli.pdf Fundamentals of Tracer Kinetics]  
Line 93: Line 95:
 
| TAC N207<br>
 
| TAC N207<br>
 
|-
 
|-
−
| <br>
+
| <br>  
 
| Calamante et al  
 
| Calamante et al  
 
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/papers/Calamante-CBV-with-MR-JCBFreview1999.pdf Measuring Cerebral Blood Flow Using Magnetic Resonance Imaging Techniques]  
 
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/papers/Calamante-CBV-with-MR-JCBFreview1999.pdf Measuring Cerebral Blood Flow Using Magnetic Resonance Imaging Techniques]  
−
| <br>
+
| <br>  
 
| Journal of Cereb Blood Flow  
 
| Journal of Cereb Blood Flow  
 
| 1999  
 
| 1999  
Line 150: Line 152:
 
| Neuroradiology
 
| Neuroradiology
 
|}
 
|}
 +
 
<br>  
 
<br>  
 +
 
|  
 
|  
 
{| width="100%" cellspacing="1" cellpadding="1" border="1"
 
{| width="100%" cellspacing="1" cellpadding="1" border="1"
Line 241: Line 245:
 
| <br>  
 
| <br>  
 
| Journal<br>  
 
| Journal<br>  
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| Tues Feb 5<br>
 +
| <br>
 +
| Evan sick<br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| Thurs Feb7<br>
 +
| <br>
 +
| Evan sick<br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| Tues Feb12<br>
 +
| <br>
 +
| Nemo snow<br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| Tues Feb 14<br>
 +
| Kety and Schmidt<br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/IUPUI-website/emorris.tar/emorris/emorris/TracerKineticsCourse2006/Papers/other%20papers/BF%20measurements/Kety%20and%20Schmidt%20NO2%20method%201948-%20jcinvest00391-0088.pdf THE NITROUS OXIDE METHOD FOR THE QUANTITATIVE DETERMINATION OF CEREBRAL BLOOD FLOW IN MAN: THEORY, PROCEDURE AND NORMAL VALUES]<br>
 +
| <br>
 +
| J&nbsp;Clnical Investigation<br>
 +
| 1948<br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/homework/ENAS%20915%20HW3%202013%20Kety%20Model%20v2.doc Homework #3]<br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| Kety<br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/IUPUI-website/emorris.tar/emorris/emorris/TracerKineticsCourse2006/Papers/Kety/Regional%20Cerebral%20Blood%20Flow...pdf Regional Cerebral Blod Flow: Estimation by means of nonmetabolized diffusible tracers - an overview]<br>
 +
| <br>
 +
| Seminars in Nucl Med<br>
 +
| 1985<br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| Dumke and Schmidt<br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/papers/dumke-bl-flo-macaque-bubble-meter-1943.pdf Quantitative Measurements of Cerebral Blood Flow in the Macaque Monkey]<br>
 +
| <br>
 +
| Amer. J. Physiol.<br>
 +
| 1942<br>
 +
| ''Supplemental''
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| Soskin et al<br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/papers/soskin-flow-meter-1934.pdf The Influence of Epinephrine Upon the Exchange of Sugar Between Blood and Muscle]<br>
 +
| <br>
 +
| Amer. J. Physiol.<br>
 +
| 1933<br>
 +
| ''Supplemental''
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| Thurs Feb 28<br>
 +
| Krogh<br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/IUPUI-website/emorris.tar/emorris/emorris/TracerKineticsCourse2006/Papers/Krogh/Krogh-%20distrib%20of%20capillaries%20in%20muscles-%20jphysiol-1919%20v52p409.pdf THE NUMBER AND DISTRIBUTION OF CAPILLARIES IN MUSCLES WITH CALCULATIONS OF THE OXYGEN PRESSURE HEAD NECESSARY FOR SUPPLYING THE TISSUE.]<br>
 +
| <br>
 +
| J Physiology<br>
 +
| 1919<br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| Crone <br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/papers/Crone-Indicator-Diffusion-method-1963.pdf The Permeability of Capillaries in Various Organs<br>as Determined by Use of the (Indicator Diffusion’ Method]<br>
 +
| <br>
 +
| Acta Physiol Scand<br>
 +
| 1963<br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| March 7 <br>
 +
| Abramowitz and Stegun<br>
 +
| [http://people.math.sfu.ca/~cbm/aands/frameindex.htm Table of Laplace Transforms]<br>
 +
|
 +
see pages 1020-1022
 +
 +
(navigate the book with the links to pages in the left column)
 +
 +
| <br>
 +
| <br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/homework/Homework_4-the%20kety%20model-solved.doc Homework #4]<br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| Sokoloff<br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/book-excerpts/Sokoloff-CBF-p18-19.pdf Excerpt from Sokoloff chapter in Phelps]<br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| Tuesday, April 2<br>
 +
| Godfrey<br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/book-chapters/Godfrey_ch1.pdf Chapter 1: Introduction to Compartmental Modeling]<br>
 +
| <br>
 +
| Compartmental Models and Their Application<br>
 +
| 1983<br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/homework/Homework_5_Krogh_Crone.pdf Homework #5]<br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| Godfrey<br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/book-chapters/Godfrey_ch2.pdf Chapter 2: The Dynamics of Linear, Time-invariant Systems]<br>
 +
| <br>
 +
| Compartmental Models and Their Application<br>
 +
| 1983<br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| Thursday, April 11<br>
 +
| Patlak et al.<br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/papers/Patlak-Jcbfm19831a.pdf Graphical Evaluations of Blood-to-Brain Transfer Constants from Multiple-Time Uptake Data]<br>
 +
| <br>
 +
| Journal of Cerebral Blood Flow and Metabolism<br>
 +
| 1983<br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| Patlak et al.<br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/papers/Patlak-jcbfm198-p587a.pdf Graphical Evaluation of Blood-to-Brain Transfer Constants from Multiple-Time Uptake Data. Generalizations]<br>
 +
| <br>
 +
| Journal of Cerebral Blood Flow and Metabolism<br>
 +
| 1985<br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| Sokoloff et al.<br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/papers/Sokoloff1977.pdf The 14C-deoxyglucose method for the measurement of local cerebral glucose utilization: theory, procedure, and normal values in the conscious and anesthetized albino rat]<br>
 +
| <br>
 +
| Journal of Neurochemistry<br>
 +
| 1977<br>
 +
| FDG<br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| Carson et al
 +
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/papers/Carson-Kbol-jcbfm19936a-1.pdf Comparison of Bolus and Infusion Methods for Receptor Quantitation: Application to 18-F-Cyclofoxy and Positron Emission Tomography ]
 +
| JCBF
 +
| 1993
 +
| look at the appendices. A: when is graphical analysis linear, B: How to calculate response to Bolus + Infusion
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| Logan et al.
 +
| [https://tauruspet.med.yale.edu/staff/edm42/IUPUI-website/emorris.tar/emorris/emorris/TracerKineticsCourse2006/Papers/Graphical%20Techniques/Logan%20et%20al,%20JCBF%201990%20Graphical%20Analysis%20of%20Reversible%20and%20Radioligand%20Binding....pdf Graphical Analysis of Reversible Radioligand Binding from Time-Activity Measurements Applied to N-''c -methyl-( -)-Cocaine PET Studies in Human Subjects]
 +
| JCBF
 +
| 1990
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| Logan
 +
| [https://tauruspet.med.yale.edu/staff/edm42/IUPUI-website/emorris.tar/emorris/emorris/TracerKineticsCourse2006/Papers/Graphical%20Techniques/Logan%20Review%20of%20Graphical%20and%20reducing%20bias%20Nuc%20Med%20Biol%202003.pdf A review of graphical methods for tracer studies and strategies to reduce bias]
 +
| Nuc med Biol
 +
| 2003
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| Slifstein and Laruelle
 +
| [https://tauruspet.med.yale.edu/staff/edm42/IUPUI-website/emorris.tar/emorris/emorris/TracerKineticsCourse2006/Papers/Graphical%20Techniques/Slifstein%20Effects%20of%20noise%20on%20Logan%20plotJNM%202000.pdf Effects of Statistical Noise on Graphic Analysis ofPET Neuroreceptor Studies]
 +
| JNM
 +
| 2000
 +
| <br>
 +
| [https://tauruspet.med.yale.edu/staff/edm42/courses/ENAS_915_2013/homework/ENAS%20915%20-%20Homework%206.docx Homework 6 - final project]
 +
| <br>
 +
| <br>
 +
|-
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 +
| <br>
 
| <br>  
 
| <br>  
 
| <br>  
 
| <br>  

Latest revision as of 01:04, 9 January 2014

--Evan 14:05, 14 March 2013 (EDT)--Evan 14:05, 14 March 2013 (EDT)Table of Handouts for ENAS 915 --- Tracer Kinetics and Modeling

Spring semester 2013

Yale

Back to ENAS 915 Homepage


Useful Wiki formatting commands here

location of book-excerpts
location of book-chapters
location of papers
location of homework

Class Period that covers the information
 Author
 Handout Title Journal Date Comment   Class Time   Room Location
Class Author Chapter/ Paper etc
 Source Publisher/Journal Year Notes Class time
 Room








TAC N207

 Kevles chapter 9 "Naked to the Bone: Medical Imaging in the 20th Century" Basic Books 1998

TAC N207

 Levi The development of the tracer method "George de Hevesy. Life and Work" Rodos
Homework #1

Tues, Jan 22 Axel methods using blood pool tracer chap 11 Diffusion-and-perfusion-Magnetic-Resnoance-Imaging (Le Bihan, ed) Raven Press 1995
5:00pm
 TAC N207

 Cobelli, Foster, and Toffolo Fundamentals of Tracer Kinetics Tracer Kinetics in Biomedical Research Kluwer Academic / Plenum Publishers 2000


Thurs, Jan 24
 Kennan and Jager
 T2- and T∗ 2 -w DCE-MRI: Blood Perfusion and Volume Estimation using Bolus Tracking
 		Quantitative MRI of the Brain (Tofts, ed)
 Wiley
 2003
 see pgs 365-377 and figures of clinical applications: 11.10-11.21
 5:15pm
 TAC N207

 Calamante et al Measuring Cerebral Blood Flow Using Magnetic Resonance Imaging Techniques
Journal of Cereb Blood Flow 1999 see pgs 701-705 and figures of applications

Tues, Jan 29
Chen et al
Akella et al
Wuerfel et al
Nabors et al
Ma et al


Automatic determination ofAIF for DCE MRI in Tumor Assessment
Assessment of Brain Tumor Angiogenesis Inhibitors Using Perfusion Magnetic Resonance Imaging: Quality and Analysis Results of a Phase I Trial
Changes in cerebral perfusion precede plaque formation in multiple sclerosis: a longitudinal perfusion MRI study
Phase I and Correlative Biology Study of Cilengitide in Patients With Recurrent Malignant Glioma
Perfusion MRI before and after acetazolamide administration for assessment of cerebrovascular reserve capacity in patients with symptomatic internal carotid artery (ICA) occlusion: comparison with 99mTc-ECD SPECT



MICCAI
Journal of Magnetic Resonance Imaging
Brain
Journal of Clinical Oncology
Neuroradiology


2008
2004
2004
2007
2007


required reading for Homework #2
optional
optional
optional
optional


5:00pm
 TAC N207


 




Thurs, Jan 31
  N O     C L A S S
 








 





Riggs chap 7 - Transfer of substances between biological compartments. Simple diffusion
 The Mathematical Approach to Physiological Problems MIT Press 1963 Notes


Riggs chap 8 - Transfer of substances between biological compartments. General kinetics The Mathematical Approach to Physiological Problems MIT Press 1963 Notes





Journal



Tues Feb 5
Evan sick





Thurs Feb7
Evan sick





Tues Feb12
Nemo snow














Tues Feb 14
 Kety and Schmidt
 THE NITROUS OXIDE METHOD FOR THE QUANTITATIVE DETERMINATION OF CEREBRAL BLOOD FLOW IN MAN: THEORY, PROCEDURE AND NORMAL VALUES
J Clnical Investigation
 1948
 Homework #3


Kety
 Regional Cerebral Blod Flow: Estimation by means of nonmetabolized diffusible tracers - an overview
Seminars in Nucl Med
 1985



Dumke and Schmidt
 Quantitative Measurements of Cerebral Blood Flow in the Macaque Monkey
Amer. J. Physiol.
 1942
 Supplemental


Soskin et al
 The Influence of Epinephrine Upon the Exchange of Sugar Between Blood and Muscle
Amer. J. Physiol.
 1933
 Supplemental










Thurs Feb 28
 Krogh
 THE NUMBER AND DISTRIBUTION OF CAPILLARIES IN MUSCLES WITH CALCULATIONS OF THE OXYGEN PRESSURE HEAD NECESSARY FOR SUPPLYING THE TISSUE.
J Physiology
 1919



Crone
The Permeability of Capillaries in Various Organs
as Determined by Use of the (Indicator Diffusion’ Method
Acta Physiol Scand
 1963











March 7
Abramowitz and Stegun
 Table of Laplace Transforms

see pages 1020-1022

(navigate the book with the links to pages in the left column)



Homework #4


Sokoloff
 Excerpt from Sokoloff chapter in Phelps














Tuesday, April 2
 Godfrey
 Chapter 1: Introduction to Compartmental Modeling
Compartmental Models and Their Application
 1983
 Homework #5


Godfrey
 Chapter 2: The Dynamics of Linear, Time-invariant Systems
Compartmental Models and Their Application
 1983


Thursday, April 11
 Patlak et al.
 Graphical Evaluations of Blood-to-Brain Transfer Constants from Multiple-Time Uptake Data
Journal of Cerebral Blood Flow and Metabolism
 1983



Patlak et al.
 Graphical Evaluation of Blood-to-Brain Transfer Constants from Multiple-Time Uptake Data. Generalizations
Journal of Cerebral Blood Flow and Metabolism
 1985



Sokoloff et al.
 The 14C-deoxyglucose method for the measurement of local cerebral glucose utilization: theory, procedure, and normal values in the conscious and anesthetized albino rat
Journal of Neurochemistry
 1977
 FDG











Carson et al Comparison of Bolus and Infusion Methods for Receptor Quantitation: Application to 18-F-Cyclofoxy and Positron Emission Tomography JCBF 1993 look at the appendices. A: when is graphical analysis linear, B: How to calculate response to Bolus + Infusion



Logan et al. Graphical Analysis of Reversible Radioligand Binding from Time-Activity Measurements Applied to N-c -methyl-( -)-Cocaine PET Studies in Human Subjects JCBF 1990




Logan A review of graphical methods for tracer studies and strategies to reduce bias Nuc med Biol 2003




Slifstein and Laruelle Effects of Statistical Noise on Graphic Analysis ofPET Neuroreceptor Studies JNM 2000
Homework 6 - final project










Retrieved from "https://tauruspet.med.yale.edu/wiki/index.php?title=Table_of_Handouts_for_ENAS_915&oldid=1079"