Difference between revisions of "PET Imaging Lab meeting"
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Jump to navigationJump to search| Line 65: | Line 65: | ||
| ''<<wiki link to your paper>>'' | | ''<<wiki link to your paper>>'' | ||
| ''<<Du et al>>'' | | ''<<Du et al>>'' | ||
| − | | ''[https://orionpet.med.yale.edu/physics/labmeeting/2012-07-18_Jan/ | + | | ''[https://orionpet.med.yale.edu/physics/labmeeting/2012-07-18_Jan/2012-Du-TMI-PVC.pdf Partial Volume Effect Compensation for Quantitative Brain SPECT Imaging]'' |
| ''<<wiki link to other data>>'' | | ''<<wiki link to other data>>'' | ||
|- | |- | ||
Revision as of 14:52, 17 July 2012
Making a wiki is fun and easy!
Imaging Lab Meeting
New time: 4:00-5:00 Wednesdays
Same Location: PET Conference room
New Atmosphere: Casual! Speaker brings treats
Presentations of recent work or a journal paper
For papers, post paper at least 1 week in advance
Note: you can link to a paper or data on any machine you like. But this is a PUBLIC wiki, so if you want people all over the world to access what you post, use taurusPET, if not, use orionpet.
| Date | Presenter | Paper or Presentation | Paper Author | Supplemental paper | Supplemental slides |
|---|---|---|---|---|---|
| 2012-mm-dd | XXX | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-08-15 | Evan | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-08-08 | Wendol | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-08-01 | NRM12 practice week | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-07-25 | Xiao | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-07-18 | Jan | <<wiki link to your paper>> | <<Du et al>> | Partial Volume Effect Compensation for Quantitative Brain SPECT Imaging | <<wiki link to other data>> |
| 2012-07-11 | Rich | Combining PET biodistribution and equilibrium dialysis assays to assess the free brain concentration and BBB transport of CNS drugs | <<Gunn et al>> | Highlighted version | <<wiki link to other data>> |
| 2012-06-27 | Tony | Benefits and Challenges of Image Reconstruction with Point Spread Function | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-06-20 | Mika | Brain Tissue Selection Procedures for Image Derived Input Functions Derived using Independent Components Analysis |
<<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-06-13 | No meeting | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-06-05 4-5pm | SNM practice | Mingqiang and Jan | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-06-04 11-12:00 | SNM practice | Mika and Jan | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-05-30 | Sasha | PET Myocardial Blood Flow from Dynamic PET and Independent Component Analysis |
<<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-05-23 | Sujin | Comparison of selectivity between in vivoand in vitro | <<author name>> | [1][2] | <<wiki link to other data>> |
| 2012-05-16 | Chi | Performance Evaluation of Siemens PET/MR Scanner | <<author name>> | Supplement Data | <<wiki link to other data>> |
| 2012-05-09 | Jenna | In vivo EGFR imaging of malignant glioma xenografts with 11C-erlotinib PET | Sullivan, Contessa, and Morris | Memon et al | <<wiki link to other data>> |
| 2012-05-02 | JD | Comparison of two smoothing algorithms based on PCA for PET data | Schafbauer et al., NRM2012 abstract | NRM2012abstract | algo 1 and algo 2 |
| 2012-04-25 | Shuo | Optimization of HYPR Filter for Detection of Smoking-Induced Dopamine Response in 11C-Raclopride PET Studies | Wang, et al. NRM2012 abstract submission | NRM2012abstract | <<wiki link to other data>> |
| 2012-04-18 | Christine | Metabotropic Glutamate Receptor 5 Radioligand C-11 ABP688 and N-Acetylcysteine Challenge in Rhesus Monkeys | Sandiego, et al. NRM2012 abstract submission | Imaging changes in glutamate transmission in vivo with mGluR5 tracer C-11 ABP688 and NAC | <<wiki link to other data>> |
| 2012-04-11 | Ed | Evaluation of a method for projection-based tissue-activity estimation within small volumes of interest | Southekal et al. | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-04-04 | Wendol | Prediction of Dose Occupancy using PET | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-03-28 | Dianne | Linear vs Nonlinear Spatial Transformations on Outcome Measures | <<Lee et al., 2012 NRM submitted>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-03-21 | Xiao | Scatter correction for TOF PET | C. C. Watson | Scatter correction for 3D PET | <<wiki link to other data>> |
| 2012-03-14 | Jan | Respiratory and Cardiac Gating for Emission Tomography | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-03-07 | Angela Park, MD PhD, SUNY Buffalo | Parkinson's disease and dopamine transporter imaging using FP-CIT | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-02-29 | Sasha | Hendrik J. Harms & Paul Knaapen & Stefan de Haan & Rick Halbmeijer & Adriaan A. Lammertsma & Mark Lubberink |
<<wiki link to other paper>> | <<wiki link to other data>> | |
| 2012-02-22 | Tony | GATE:a simulation toolkit for PET and SPECT | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-02-15 | Mika | Kappa opioid receptors: comparison of pkab and mkap | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-02-08 | Sujin | A linear model for estimation of neurotransmitter response profiles from dynamic PET data | Marc D. Normandin et al | A novel method for noninvasive detection of neuromodulatory changes in specific neurotransmitter systems | Visualization of Dopamine Dynamics from PET Images |
| 2012-02-01 | Chi | An Overview on PET/CT-Guided Radiation Therapy | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-01-25 | Jenna | A cautionary tale on the use of SRTM, Logan, and the equilibrium method (work in progress) | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2012-01-18 | JD | Quantification of ligand PET studies using a reference region with a displaceable fraction application to occupancy studies with 11C DASB as an example | Federico E Turkheimer et al. | Rank-shaping regularization of exponential spectral analysis for application to functional parametric mapping | Acute Occupancy of Brain Serotonin Transporter by Sertraline as Measured by 11C DASB and Positron Emission Tomography |
| 2012-01-11 | Christine | Multi-Transform Method for NHP PET-MR registrations | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-12-21 | Ed | Segmentation of Mouse Dynamic Images Using a Multiphase Level Set Method | Cheng-Liao et al. | [3] k-means [4] LMA | <<wiki link to other data>> |
| 2012-12-14 | meeting cancelled | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-12-07 | Shuo | PVC on PET amyloid data | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-11-30 | Dianne | C11-MRB in Cocaine Dependent Subjects | <<Ding et al.>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-11-16 | Xiao | List-mode reconstruction for FOCUS220 | Xiao | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-11-09 | Jan | Physical Performance of the new hybrid PET/CT Discovery-690 | Bettinardi et al | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-11-02 | Rich | Performance Evaluation of the mCT | Jakoby et al | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-10-26 | Sasha |
Quantitative Dynamic Cardiac 82Rb PET using Generalized Factor and Compartment Analysis |
Fakhri | http://jnm.snmjournals.org/content/46/8/1264.long | <<wiki link to other data>> |
| 2011-10-19 | Tony | [5]
Validation of Spatially Variant Probability Density Functions for the HRRT |
<<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-10-12 | Mika | Work in Progress -scan time reduction- | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-10-05 | Chi | A Review of Respiratory Motion Correction Methods for PET/CT | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-09-28 | Jun Deng | Cone Beam CT Imaging Doses and Dose Reduction Strategies | Guest Speaker from Department of Therapeutic Radiology | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-09-21 | Jenna | Development of PET Methodologies for Imaging Addiction (and homebrew tasting: Jenna's Irish Stout and Belgian Amber vs. Sam Adam's Cream Stout and Stone Levitation Ale) | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-09-14 | Sujin | Specificity of 11C-PKAB for kappa opioid receptor | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-09-07 | JD | Digital Atlas of the Rhesus Monkey Brain in Stereotactic Coordinates | Chakravarty | An MRI based average macaque monkey stereotaxic atlas and space | <<wiki link to other data>> |
| 2011-08-31 | Dr. Tinsu Pan | Advances in Instrumentation for PET CT Imaging of the Thorax for Radiation Therapy and Myocardial Perfusion Imaging | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-08-24 | Julia and Jenna | Dynamic image phantom to study the effect of motion on raclopride BPND in nicotine/smoking studies | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-08-17 | Christine | Comparison of awake and anesthetized NHP Benzodiazepine BPnd with C-11 FMZ and equilibrium analysis | Gyulai et al., 2001 | Dose-dependent enhancement of in vivo GABA-A Benzodiazepine receptor binding by isoflurane | <<wiki link to other data>> |
| 2011-08-10 | Ed | Input Function Work in Progress | <<author name>> | Level Set Basics | Level Set Carotids |
| 2011-08-03 | Xiao | Event-based motion correction for PET transmission measurements with a rotating point source | Zhou et al. | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-07-27 | Dianne | PHNO side effects? | <<Wilson>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-07-20 | Olene | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-07-13 | Rachael | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-07-06 | Jan | The use of anatomical information in ECT reconstruction and processing | Somayajula | PET Image Reconstruction Using Information Theoretic Anatomical Priors | <<wiki link to other data>> |
| 2011-06-29 | Tony | Progress in spatially variant PSF modeling for the HRRT | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-06-22 | Rich | PET Imaging in Cancer | Talk for Yale Cancer Center Retreat | <<>> | <<>> |
| 2010-10-25 | Bob Malison** | Inhibition of aldehyde dehydrogenase-2 suppresses cocaine seeking by generating THP, a cocaine use-dependent inhibitor of dopamine synthesis | Yao | comment: the question on the table is can this turn into a PET study? | |
| 2010-11-29 | Sujin | A consistent and efficient graphical analysis method to improve the quantification of reversible tracer binding in radioligand receptor dynamic PET studies | Zhou | A review of graphical methods for tracer studies and strategies to reduce bias | see eqn 6b in review by J Logan |
| 2010-12-06 | meeting cancelled | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2010-12-13 | Xiao | Software Architecture of the MOLAR-HRRT Reconstruction Engine | Johnson | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2010-12-20 | meeting cancelled | <<wiki link to your paper>> | <<wiki link to other paper>> | <<wiki link to other data>> | |
| 2011-01-24 | Ed | A Scatter Calibration Technique for Dynamic Brain Imaging in High Resolution PET | Cheng | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-01-17 | XXXXX MLK day | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-02-07 | Christine | Isoflurane anaesthesia differentially affects amphetamine sensitivity of agonist and antagonist D2/D3 PET radiotracers: Implications for in vivo imaging of dopamine release | McCormick | <<wiki link to other paper>> | Background Slides |
| 2011-02-14 | JD | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-02-21 | Dianne | Selective Interaction of Lansoprazole and Astemizole with Tau Polymers: Potential New Clinical Use in Diagnosis of Alzheimer’s Disease | Rojo | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-02-28 | meeting cancelled | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-03-09 | Marc | A method to estimate dispersion in sampling catheters and to calculate dispersion-free blood time-activity curves | Munk | <<wiki link to other paper>> | Dispersion correction by deconvolution used at Yale PET Center |
| 2011-03-23 | Mika | Past studies on alpha-7 receptor agonists | alpha7 Nicotinic Receptor Agonists: Potential Therapeutic Drugs for Treatment of Cognitive Impairments in Schizophrenia and Alzheimer's Disease | <<wiki link to other data>> | |
| 2011-04-06 | Evan | Barking Up the Wrong Tree? Industry Funding of Academic Research. A Case Study with Commentaries | Schrag et al | In the Grip of the Python: Conflicts at the Unioversity-Industry Interface (Healy) | Yale Conflict of Interest Policy |
| 2011-04-13 | Chi | Ultrafast Dedicated Cardiac SPECT | Garcia et al | Comments: Followed by a tour to the Yale Translational Research Imaging Center | <<wiki link to other data>> |
| 2011-04-27 | Tony | Bias in iterative reconstruction of low-statistics PET data: benefits of a resolution model | M Walker | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-05-04 | Wendol | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-05-11 | BrainPET practice | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-05-18 | BrainPET practice | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-06-01 | SNM practice | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
| 2011-05-11 | speaker | <<wiki link to your paper>> | <<author name>> | <<wiki link to other paper>> | <<wiki link to other data>> |
** Guest speaker
Meeting List
... by popular demand... now in sortable-table format!... Send email to the organizer
... 'Note: starting with 2009-10-19, we will try meeting on Mondays at 4:00pm... ... Note: Meetings for July 5 and July 26 have been canceled due to anticipated low attendance ... ... (July 5 is a Yale Holiday; June 26 is probably the day that many will be traveling back from NRM)
| Shaded entries indicate one cycle through regular presenters |
Instructions for adding entries
Evan's Step-by-step Guide
- 1. Save the document (you intend to present) in the standard location: pet/www/pysics/labmeeting/subfolder on orionpet.med.yale.edu (don't use spaces in the filename).
- 2. Return to this Wiki and click on the edit tab at the top of this page. You must be logged in.
- 3. Add the required items, between the appropriate column symbols ( || item || ), to the table under Meeting List. Add separator lines, ( |- ) between entries. Be sure to add the date in the proper format so we can sort the table by date. See example, below.
- 4. Click on the Save Page button at the bottom of the editor.
Example Code
- The php code for a sample row entry in the table looks like this:
|-
| '''YYYY-MM-DD'''
| '''Presenter_name'''
| 1 or 2
| Name of person to be primary questioner
| [https://orionpet.med.yale.edu/physics/labmeeting/directory_name/precise_filename Paper Title ]
| author_of_paper_to_be_presented
| [https://orionpet.med.yale.edu/physics/labmeeting/directory_name/precise_extra_filename Extra Paper Title ]
| [https://orionpet.med.yale.edu/physics/labmeeting/directory_name/precise_slides_filename Slide Presentation Title ]
|-
- The row appears like this in the table
| YYYY-MM-DD | Presenter_name | 1 or 2 | questioner | Paper Title | author_of_paper_to_be_presented | Extra Paper Title | Slide Presentation Title |
Meeting List
... by popular demand... now in sortable-table format!... Send email to the organizer
... 'Note: starting with 2009-10-19, we will try meeting on Mondays at 4:00pm... ... Note: Meetings for July 5 and July 26 have been canceled due to anticipated low attendance ... ... (July 5 is a Yale Holiday; June 26 is probably the day that many will be traveling back from NRM)
| Shaded entries indicate one cycle through regular presenters |
Instructions for adding entries
Evan's Step-by-step Guide
- 1. Save the document (you intend to present) in the standard location: pet/www/pysics/labmeeting/subfolder on orionpet.med.yale.edu (don't use spaces in the filename).
- 2. Return to this Wiki and click on the edit tab at the top of this page. You must be logged in.
- 3. Add the required items, between the appropriate column symbols ( || item || ), to the table under Meeting List. Add separator lines, ( |- ) between entries. Be sure to add the date in the proper format so we can sort the table by date. See example, below.
- 4. Click on the Save Page button at the bottom of the editor.
Example Code
- The php code for a sample row entry in the table looks like this:
|-
| '''YYYY-MM-DD'''
| '''Presenter_name'''
| 1 or 2
| Name of person to be primary questioner
| [https://orionpet.med.yale.edu/physics/labmeeting/directory_name/precise_filename Paper Title ]
| author_of_paper_to_be_presented
| [https://orionpet.med.yale.edu/physics/labmeeting/directory_name/precise_extra_filename Extra Paper Title ]
| [https://orionpet.med.yale.edu/physics/labmeeting/directory_name/precise_slides_filename Slide Presentation Title ]
|-
- The row appears like this in the table
| YYYY-MM-DD | Presenter_name | 1 or 2 | questioner | Paper Title | author_of_paper_to_be_presented | Extra Paper Title | Slide Presentation Title |
